Search results for "Chromatin interaction networks"

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Topological structure analysis of chromatin interaction networks.

2019

Abstract Background Current Hi-C technologies for chromosome conformation capture allow to understand a broad spectrum of functional interactions between genome elements. Although significant progress has been made into analysis of Hi-C data to identify biologically significant features, many questions still remain open, in particular regarding potential biological significance of various topological features that are characteristic for chromatin interaction networks. Results It has been previously observed that promoter capture Hi-C (PCHi-C) interaction networks tend to separate easily into well-defined connected components that can be related to certain biological functionality, however, …

Chromatin interaction networksFunctionally related modulesComputer scienceCellStructure (category theory)Topologylcsh:Computer applications to medicine. Medical informaticsBiochemistryGenomeChromosome conformation capture03 medical and health sciences0302 clinical medicineGraph topologyStructural BiologyComponent (UML)medicineHumansGene Regulatory NetworksCell type specificityPromoter Regions GeneticMolecular Biologylcsh:QH301-705.5030304 developmental biologyConnected component0303 health sciencesApplied MathematicsResearchChromatinComputer Science ApplicationsChromatinHematopoiesisIdentification (information)medicine.anatomical_structurelcsh:Biology (General)Gene Expression RegulationTopological graph theorylcsh:R858-859.7DNA microarray030217 neurology & neurosurgeryAlgorithmsBMC bioinformatics
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